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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787321.1_cds_XP_016451157.1_48
CDS Infomation

[gene=LOC107775605] [db_xref=GeneID:107775605] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570] [protein_id=XP_016451157.1] [location=join(2309..3923,3967..5133,5273..5631)] [gbkey=CDS]
Sequence

ATGGATTCAGCATTGTTCTCCTTCTATCAGTCAGTAACTAGTAAATTTTCCCTTCTATTC
TTCATTACAAGTTTTCTTTGTATTTCTGTGGCATTGTGTCATGGCAATGACACAGACCAA
CAAGCACTACTTGTATTCAGGAGAGCAATAAAGGATCCTTTTGGATATATGAAACCATGG
AATGTATCCACACACTTTTGCCAGTGGCCTGGTATTACTTGTGGACGTAAACACATGAGA
GTCATTCAACTAAACCTCGCGAACCAAAATCTAGATGGTCCCTTGTCGCCCTTTATTGGC
AACATGAGTTTTCTCAGGTCTCTATACCTGTCAAACAATAGCTTCCGTGGTGAAATCCCC
TCGGAGATAGGTCGTTTGAGAAGGCTACAACGATTGAATCTTGGCAACAACTCATTTCAT
GGTGATATTCCTTCAAATTTATCAAGGTGCACAAATCTTGTATCTCTTGTCCTTGGAGGT
AACAAGTTAGTCGGAAGTCTTCCTCCCCAGCTAGGCTCATTGTCCAAACTCGAATACTTT
TTACTCACTCGAAACAACTTGACAGGTGAAATCCCTTCTTCTTTTGGAAACTTAACATCG
TTGAAAGGATTCTATGCACCATTGAATAATCTTCAAGGGAAAATCCCTGACTCACTCGGG
CAGCTAAAAAACTTAAAAAGTTTAGGAATAGCTGCAAACAATTTGACAGGTACCATTCCT
TATGCAATCTTCAACATCTCTTCCATGACAACATTTGATGTTGGAATAAACCAAATTCAA
GGTACTCTTCCTTCAAGTTTGGGAATCACCCTCCCGAATCTTGAACTATTTATAATTGGT
GGGAACAATATTTCTGGATCAATACCATCTTCATTGTCCAATTCATCAAAGTTAGTGTAT
TTTCTTGCGGGAGGTAATCAACTTACAGGAAGTGTACCAAGTCTTGAAAACCTGAATGAG
CTTCAACAGTTAACCATTCCAGGGAATTATCTTGGAACTGGAGAACTAGATGACTTAAGT
TTCATCTCCTCTTTGACAAATGCATCTAGTTTCAGAATTTTGGAGATGCAGTTCAATAGT
TTTGGAGGAATTCTGCCTTTATCCTTCCGAAATCTCTCAAATGAGCTTCAGGTTGTGCAG
TTGTCATACAACAAAATACGTGGTAACATACCGGCTGAGATTGGAAATTTCATCAACTTG
GAAGAATTTCAGGTGAGGGAAAACTTACTCACTGGTACTATTCCAACCAATCTTGGAAAA
GTTAAAAACTTGCAGATTTTGGATTTGTCTCAGAATAGATTTTCTGGGAATATTCCATCA
TCTCTAGGAAATCTGAGTGTAGTAACCATCCTTCTTTTTCACGATAATGATCTTACGGGT
GAGATACCAGCAAGTTTAGGAAATTGCAATAATTTGATTGAAATATATGTTGCTCAAAAT
AACCTGTTAGGACAAATACCTAAGGAACTTTTTGCTCTCTCTTCCTTAGTTGCTGTAGAT
ATTTCTGAGAACCATCTAGATGGTTTCATTCCTCTCGAAGCTGGACACATGAGAAATCTC
GAATATCTCAATGTTTCCGAGAACAATTTGACTGGCAAAATCCCAAGTACCATTGATGGT
TTCATTCCTCTCGAAGCTGGAAACATGAGAAATCTCGAGTATCTCAATGTTTCCGAGAAC
AACTTGACTGGCAAAATACCAAGTACCATTGGTAGCTGTGTGAGACTTGAAGTCTTAGAC
ATGAAAGGAAACTCTTTTCAAGGAATTATTCCACCTTCTTTCAGTTCTTTGAGAGGTCTC
CATGTTTTAGACCTTTCTAGGAATAACTTGTCTGGTCAAGTACCAAATTACTTGGAAGAT
TTTAAGTTTCAACTCCTTAATTTGTCGTTCAATGGTTTCGAAGGAATGTTACCAAATGAA
GGCATCTTTAAGAATGCAAGTGTAATATCAGTAATTGGAAATCCAAAACTTTGTGGGGGT
GTGCCTAACATACATCTTCCGGAGTGCGACATCAAAAGATCAAAAAAACTTGGTTCGAGG
TTTATCCTCAAGATTGTGATCTCTATTGTCGTTGGTATACTAGGACTTACCATTCTAGTC
ACTTTACTATTTTTTTTCTTGTTCAAGAAACCCAAAAAGGGGCCTGTTTTGAGCTCATTT
GGCGAATCTCTCATAAATGTTTCTTACCAAAGTTTGCTTCAAGCTACTAATGGATTCTCT
GAAGACAACTTGATTGGTGCTGGTAGCTATGGATCTGTGTATAAAGGAACTCTTGATGGA
GGAATAGTCGTCGCAGTGAAAGTATTAAACCTCTCGCGACATGGAGCTTCCAAAAGCTTT
ATGGCTGAATGTGAAGTCTTGAGAAACATAAGACATCGGAATTTGGTCAAGGTTCTCACA
GCTTGTTCAGGAACTGACTATCAAGGGAATGAATTCAAGGCTTTGGTTTACGAGTTTATG
GCTAATGGCAGCCTCGAAGACTGGTTGCATCCGAGTCCAAGTGAAGATGCAAATCTGGCA
GAATCAAAAAAGTTGAATATTCTTCAAAGGCTCAACATTGCTATTGATGTTGCTTCTGCA
ATCGATTATCTTCATCACCACTGTGAGACTCCGATAATTCACTGTGATCTCAAGCCAAGC
AACATTCTTCTAGACGATAGATTGGTTGGTCATATTGGTGATTTTGGTTTGGCAAAATTC
CTTCAACCAACTGCACAAAATTCTTCTGTTTCAGAGGGAAGCTCTAGTCTTGTTAGAGGA
ACTATTGGTTACACTGCTCCAGAATATGGGATGGGCAGCGAGCTATCGACTTGTGGTGAT
GTATACAGCTTCGGAATCCTCTTGCTTGAAATGTTCACAGGAAAAAGGCCAACAGATGGA
ATGTTTAGGGATGGTTTAGACCTGCCGAGTTTTGCTAAGTATGCGTTGCTTAATGGAGCT
ACAGAAGTCATAGAACCATCCCTTATTTCCGGAAGTAATGAAGAGAATGGAGGTCAAAAC
ACAAGTATGTACCAGAATAAGGAGTGTCTGGTTTCTATACTTCAAGTTGGGGTTGCTTGC
TCGGCATATTCTGGAGCTGAAAGAATGAACATCACTGAAACTGTTTCTAAATTGTACTCT
ATCAGAGATGCTGTCATGTGA

Peptide Sequence

PEP ID

XP_016451157.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Nicotiana tabacum]
Sequence

MDSALFSFYQSVTSKFSLLFFITSFLCISVALCHGNDTDQQALLVFRRAIKDPFGYMKPW
NVSTHFCQWPGITCGRKHMRVIQLNLANQNLDGPLSPFIGNMSFLRSLYLSNNSFRGEIP
SEIGRLRRLQRLNLGNNSFHGDIPSNLSRCTNLVSLVLGGNKLVGSLPPQLGSLSKLEYF
LLTRNNLTGEIPSSFGNLTSLKGFYAPLNNLQGKIPDSLGQLKNLKSLGIAANNLTGTIP
YAIFNISSMTTFDVGINQIQGTLPSSLGITLPNLELFIIGGNNISGSIPSSLSNSSKLVY
FLAGGNQLTGSVPSLENLNELQQLTIPGNYLGTGELDDLSFISSLTNASSFRILEMQFNS
FGGILPLSFRNLSNELQVVQLSYNKIRGNIPAEIGNFINLEEFQVRENLLTGTIPTNLGK
VKNLQILDLSQNRFSGNIPSSLGNLSVVTILLFHDNDLTGEIPASLGNCNNLIEIYVAQN
NLLGQIPKELFALSSLVAVDISENHLDGFIPLEAGHMRNLEYLNVSENNLTGKIPSTIDG
FIPLEAGNMRNLEYLNVSENNLTGKIPSTIGSCVRLEVLDMKGNSFQGIIPPSFSSLRGL
HVLDLSRNNLSGQVPNYLEDFKFQLLNLSFNGFEGMLPNEGIFKNASVISVIGNPKLCGG
VPNIHLPECDIKRSKKLGSRFILKIVISIVVGILGLTILVTLLFFFLFKKPKKGPVLSSF
GESLINVSYQSLLQATNGFSEDNLIGAGSYGSVYKGTLDGGIVVAVKVLNLSRHGASKSF
MAECEVLRNIRHRNLVKVLTACSGTDYQGNEFKALVYEFMANGSLEDWLHPSPSEDANLA
ESKKLNILQRLNIAIDVASAIDYLHHHCETPIIHCDLKPSNILLDDRLVGHIGDFGLAKF
LQPTAQNSSVSEGSSSLVRGTIGYTAPEYGMGSELSTCGDVYSFGILLLEMFTGKRPTDG
MFRDGLDLPSFAKYALLNGATEVIEPSLISGSNEENGGQNTSMYQNKECLVSILQVGVAC
SAYSGAERMNITETVSKLYSIRDAVM

Transcript Sequence

Gene sequence data has not been registered.